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Ucsf chimera is a program for the interactive visualization and analysis of molecular structures and related data, including density maps, trajectories, and sequence alignments While chimerax has new areas of application and far greater capabilities than chimera, it is also intended to serve as a replacement for chimera for most users. It is available free of charge for noncommercial use
Commercial users, please see chimera commercial licensing. Your local copy of the documentation can be accessed and searched from the chimera help menu. Current production releases see the release notes for a list of new features and other information
For more recent changes, use the snapshot and daily builds
They are less tested but usually reliable Daily builds new builds are made when the code changes. Video tutorials and tutorials from past chimera workshops are also available This page contains still more tutorials
Calculate and visualize apbs electrostatic potential by thomas evangelidis Comparing different ligands of the same protein It is free for academic, government, nonprofit, and personal use Commercial users, please see commercial licensing
Please cite chimerax in publications.
Ucsf chimera documentation index using chimera User's guide, latest production release Contour surfaces, meshes and volumetric display styles are provided and thresholds can be changed interactively. Atoms (default), bonds, or pseudobonds (synonym pbonds)
By default (attachedhyds true), any hydrogens directly bonded to atoms. Chimera documentation, including the user's guide, is bundled with each download
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